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| Issue Date | Title | Author(s) | Type | Access Type |
| 2014 | Assessing variation in bacterial composition between the rhizospheres of two mangrove tree species | Gomes, Newton C. M.; Cleary, Daniel F. R.; Pires, Ana C. C.; Almeida, Adelaide; Cunha, Ângela; Mendonça-Hagler, Leda C. S.; Smalla, Kornelia | article |  |
| 2012 | Assessment of variation in bacterial composition among microhabitats in a mangrove environment using DGGE fingerprints and barcoded pyrosequencing | Cleary, Daniel F. R.; Smalla, Kornelia; Mendonça-Hagler, Leda C. S.; Gomes, Newton C. M. | article |  |
| 2015 | Bacterial community composition and predicted functional ecology of sponges, sediment and seawater from the thousand islands reef complex, West Java, Indonesia | de Voogd, Nicole J.; Cleary, Daniel F. R.; Polónia, Ana R. M.; Gomes, Newton C. M. | article | |
| 27-Jun-2024 | Bacterioplankton community diversity of a portuguese aquifer system (Maciço Calcário Estremenho) | Figueiredo, Daniela R. de; Melo, Maria T. Condesso de; Saraiva, Pedro P.; Oliveira, Joana; Gonçalves, Ana M. M.; Reboleira, Ana Sofia P. S.; Polónia, Ana R. M.; Abrantes, Nelson; Cleary, Daniel F. R. | article | |
| 25-Nov-2022 | Bacterioplankton Community Shifts during a Spring Bloom of Aphanizomenon gracile and Sphaerospermopsis aphanizomenoides at a Temperate Shallow Lake | de Figueiredo, Daniela R.; Lopes, Ana R.; Pereira, Mário J.; Polónia, Ana R. M.; Castro, Bruno B.; Gonçalves, Fernando; Gomes, Newton C. M.; Cleary, Daniel F. R. | article | |
| 2015 | Composition and predicted functional ecology of mussel-associated bacteria in Indonesian marine lakes | Cleary, Daniel F. R.; Becking, Leontine E.; Polónia, Ana R. M.; Freitas, Rossana M.; Gomes, Newton C. M. | article | |
| 2015 | Composition and predictive functional analysis of bacterial communities in seawater, sediment and sponges in the spermonde archipelago, Indonesia | Cleary, Daniel F. R.; de Voogd, Nicole J.; Polónia, Ana R. M.; Freitas, Rossana; Gomes, Newton C. M. | article | |
| 2014 | Composition of Archaea in seawater, sediment, and sponges in the Kepulauan Seribu reef system, Indonesia | Polónia, Ana R. M.; Cleary, Daniel F. R.; Duarte, Leticia N.; de Voogd, Nicole J.; Gomes, Newton C. M. | article | |
| 2013 | Contrasting habitats occupied by sibling spider crabs Maja squinado and Maja brachydactyla (Brachyura, Majidae) can influence the biochemical variability displayed by newly hatched larvae | Calado, Ricardo; Guerao, Guillermo; Gras, Noelia; Cleary, Daniel F. R.; Rotllant, Guiomar | article | |
| 2014 | Coral reefs next to a major conurbation: a study of temporal change (1985-2011) in Coral cover and composition in the reefs of Jakarta, Indonesia | Cleary, Daniel F. R.; Polónia, Ana R. M.; Renema, Willem; Hoeksema, Bert W.; Wolstenholme, Jackie; Tuti, Yosephine; De Voogd, Nicole J. | article | |
| Aug-2012 | Denaturing gradient gel electrophoresis and barcoded pyrosequencing reveal unprecedented archaeal diversity in mangrove sediment and rhizosphere samples | Pires, Ana C. C.; Cleary, Daniel F. R.; Almeida, Adelaide; Cunha, Ângela; Dealtry, Simone; Mendonça-Hagler, Leda C. S.; Smalla, Kornelia; Gomes, Newton C. M. | article | |
| 2013 | Development and validation of an experimental life support system for assessing the effects of global climate change and environmental contamination on estuarine and coastal marine benthic communities | Coelho, Francisco J. R. C.; Rocha, Rui J. M.; Pires, Ana C. C.; Ladeiro, Bruno; Castanheira, José M.; Costa, Rodrigo; Almeida, Adelaide; Cunha, Ângela; Lillebo, Ana Isabel; Ribeiro, Rui; Pereira, Ruth; Lopes, Isabel; Marques, Catarina; Moreira-Santos, Matilde; Calado, Ricardo; Cleary, Daniel F. R.; Gomes, Newton C. M. | article | |
| 2013 | Habitat- and host-related variation in sponge bacterial symbiont communities in Indonesian waters | Cleary, Daniel F. R.; Becking, Leontine E.; de Voogd, Nicole J.; Pires, Ana C. C.; Polónia, Ana R. M.; Egas, Conceição; Gomes, Newton C. M. | article | |
| 2014 | Halophyte plant colonization as a driver of the composition of bacterial communities in salt marshes chronically exposed to oil hydrocarbons | Oliveira, Vanessa; Gomes, Newton C. M.; Cleary, Daniel F. R.; Almeida, Adelaide; Silva, Artur M. S.; Simões, Mário M. Q.; Silva, Helena; Cunha, Ângela | article | |
| 2016 | Integrated analysis of bacterial and microeukaryotic communities from differentially active mud volcanoes in the Gulf of Cadiz | Coelho, Francisco J. R. C.; Louvado, Antonio; Domingues, Patricia M.; Cleary, Daniel F. R.; Ferreira, Marina; Almeida, Adelaide; Cunha, Marina R.; Cunha, Angela; Gomes, Newton C. M. | article | |
| 2013 | Interactive effects of global climate change and pollution on marine microbes: the way ahead | Coelho, Francisco J. R. C.; Santos, Ana L.; Coimbra, Joana; Almeida, Adelaide; Cunha, Ângela; Cleary, Daniel F. R.; Calado, Ricardo; Gomes, Newton C. M. | article | |
| 2014 | Interannual variability in the biochemical composition of newly hatched larvae of the spider crab Maja brachydactyla (Decapoda, Majidae) | Rotllant, Guiomar; Simeó, Carles G.; Guerao, Guillermo; Sastre, Marta; Cleary, Daniel F. R.; Calado, Ricardo; Estévez, Alicia | article | |
| 2013 | Lock, stock and two different barrels: comparing the genetic composition of morphotypes of the Indo-Pacific sponge Xestospongia testudinaria | Swierts, Thomas; Peijnenburg, Katja T. C. A.; de Leeuw, Christiaan; Cleary, Daniel F. R.; Hörnlein, Christine; Setiawan, Edwin; Wörheide, Gert; Erpenbeck, Dirk; de Voogd, Nicole J. | article | |
| 2013 | Molecular analysis of bacterial communities and detection of potential pathogens in a recirculating aquaculture system for Scophthalmus maximus and Solea senegalensis | Martins, Patrícia; Cleary, Daniel F. R.; Pires, Ana C. C.; Rodrigues, Ana Maria; Quintino, Victor; Calado, Ricardo; Gomes, Newton C. M. | article | |
| 2011 | Morphometric variation in two intertidal littorinid gastropods | Queiroga, Henrique; Costa, Rolando; Leonardo, Nélia; Soares, Débora; Cleary, Daniel F. R. | article | |